GTE (Group Technical Effects)

GTE quantifies batch effects for individual genes in single-cell data.

Installation

To run GTE, install from GitHub through devtools directly:

install.packages('devtools')
library(devtools)
devtools::install_github("yzhou1999/GTE")

Usage

For usage examples, please see the vignettes directory of the repository.

• Group technical effects calculation and highly technical genes selection

Dependencies

GTE has been successfully installed and used on Windows, Linux and Mac OS (R version >= 4.0.2).