Function reference • SIGNAL

All functions

Run.LabelTransfer.Single(): Predict cell labels of query data using cell labels of reference data.

Run.PGTV.Single.Cycle(): Predict cell labels for a data matrix using its given cell labels.

Run.PGTV.Single(): Predict cell labels using group technial effects.

Run.gcPCA(): Group-centralized principal component analysis

compute_cov(): Compute covariance matrix

cosineNorm(): Cosine normalize data matrix

group_mmt(): Compute the sum of the outer product of the scaled group means

group_onehot(): Compute one-hot matrix for given data frame and variable (s)

scale_data(): Scale data matrix